Package: Rtrack 2.0.3.1
Rupert Overall
Rtrack: Spatial Navigation Strategy Analysis
A toolkit for the analysis of paths from spatial tracking experiments and calculation of goal-finding strategies. This package is centered on an approach using machine learning for path classification.
Authors:
Rtrack_2.0.3.1.tar.gz
Rtrack_2.0.3.1.zip(r-4.5)Rtrack_2.0.3.1.zip(r-4.4)Rtrack_2.0.3.1.zip(r-4.3)
Rtrack_2.0.3.1.tgz(r-4.4-any)Rtrack_2.0.3.1.tgz(r-4.3-any)
Rtrack_2.0.3.1.tar.gz(r-4.5-noble)Rtrack_2.0.3.1.tar.gz(r-4.4-noble)
Rtrack_2.0.3.1.tgz(r-4.4-emscripten)Rtrack_2.0.3.1.tgz(r-4.3-emscripten)
Rtrack.pdf |Rtrack.html✨
Rtrack/json (API)
NEWS
# Install 'Rtrack' in R: |
install.packages('Rtrack', repos = c('https://rupertoverall.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/rupertoverall/rtrack/issues
Last updated 12 months agofrom:9301cc1762. Checks:OK: 7. Indexed: yes.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Nov 22 2024 |
R-4.5-win | OK | Nov 22 2024 |
R-4.5-linux | OK | Nov 22 2024 |
R-4.4-win | OK | Nov 22 2024 |
R-4.4-mac | OK | Nov 22 2024 |
R-4.3-win | OK | Nov 22 2024 |
R-4.3-mac | OK | Nov 22 2024 |
Exports:calculate_metricscall_strategycheck_experimentexport_dataexport_resultsidentify_track_formatplot_densityplot_pathplot_strategiesplot_variableread_arenaread_experimentread_paththreshold_strategies
Dependencies:backportsbase64encbitopsbslibcachemcellrangercheckmatecliclustercolorspacecpp11crayondata.tabledigestevaluatefansifarverfastmapfontawesomeforeignFormulafsggplot2gluegridExtragtablehighrHmischmshtmlTablehtmltoolshtmlwidgetsisobandjquerylibjsonliteKernSmoothknitrlabelinglatticelifecyclemagrittrMASSMatrixmemoisemgcvmimemunsellnlmennetopenxlsxpbapplypillarpkgconfigprettyunitsprogressR6randomForestrappdirsRColorBrewerRcppRCurlreadxlrematchrjsonrlangrmarkdownrpartrstudioapisassscalesstringistringrterratibbletinytexutf8vctrsviridisviridisLitewithrxfunyamlzip
Readme and manuals
Help Manual
Help page | Topics |
---|---|
Calculation of spatial search path metrics. | calculate_metrics |
Calculation of search strategies. | call_strategy |
Check experiment data. | check_experiment |
Export experiment data to a trackxf file. | export_data |
Export experiment results to a dataframe or file. | export_results |
Check the format of a track file. | identify_track_format |
Plot a path density map. | plot_density |
Plot a path. | plot_path |
Plot water maze strategies. | plot_strategies |
Plot path metrics. | plot_variable |
Read an arena description. | read_arena |
Read experiment data. | read_experiment |
Read path coordinates from raw data formats. | read_path |
Subset an rtrack_strategies object. | threshold_strategies |